Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796720.1_cds_XP_016451061.1_4473
CDS Infomation

[gene=LOC107775791] [db_xref=GeneID:107775791] [protein=probable protein phosphatase 2C 38] [protein_id=XP_016451061.1] [location=complement(join(37051..37290,37663..37899,38055..38422,39648..39948))] [gbkey=CDS]
Sequence

ATGATTAAGCCTTGTTGGAAGCCTTATGTTGAGGGGGATGGTGTAGGGAGGGGTGGTGAT
ACTAGGGGTAGAGTTGATGGTTTAATGTGGTATAAGGATTTAGGGGTTCATGCAAATGGA
GAATTTTCAATGGGAACTATACAAGCCAATAATTTGATGGAAGATCAAAGTCAACTTGAA
TCAGGGCCATTGAGTTGTCTTGAATCAGGTCCAAATGGAACATTTGTTGGAGTCTATGAT
GGACATGGAGGACCGGAGACGTCCCGCTTCGTAAACAACACTTTGTTCTCCAATCTTAAG
AAATTTGCGACAGAACATCAAGAAATGTCTGCAGATGTCATAAAAAAAGCTTTCTTGACA
ACTGAAGAGGAGTTTTTGTCACTTGTCAAGCAACAATGGTTTGAGAAGCCACAAATTGCA
TCAGTGGGATCATGCTGTTTGGTGGGCGTAATCTGCAGCGGACTACTATATGTTGCCAAT
GCCGGAGATTCACGAGTGGTATTAGGTAGAGCAGAAAAAGGTGCAAGGGGTGTGACAGCT
ATCCAATTGTCAATGGAGCACAACGCTAATAATGAGTCTGTTAGAGATGAGCTTAGATCA
TTGCATCCCCAGGATTCGCAGATTGTGCTTCTCAAACACAAAGTTTGGCGTGTCAAGGGT
ATCATACAGGTTTCAAGGTCCATTGGTGATGCCTATCTTAAGAAGGCAGAGTTCAATCGG
GCACCATTATTAGCAAAGTTTAGATTGCCCGAGTCCTTCTCTACACCAATCCTCAGTGCG
GAGCCATCAATATTCATTCACAGGTTGACTTCCAAGGATCAGTTCCTCATATTTGCTTCA
GATGGTCTCTGGGAACATCTTAGTAACCAGGAGGCTGTTGATACAGTCCACAGTCAACCC
CGAAATGGGATAGCAAGGAGACTAATCAAAGCTGCTCTTCGGGTGGCAGCTAAGAAAAGA
GAAATGAGATATTCAGACCTGAAGAAGATCGAACGAGGTGTACGGAGGCATTTCCATGAT
GATATCACGGTCGTGGTTGTGTTTATGGATCCATATTCCATGAACAGAAGCTCTTCTCAA
AGTCCAATACTCTCCATTAGAGGAGGAGGAGGAGGAGGAGGTATGCCCGCCTCTCCCAAA
CGATAG

Peptide Sequence

PEP ID

XP_016451061.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 38 [Nicotiana tabacum]
Sequence

MIKPCWKPYVEGDGVGRGGDTRGRVDGLMWYKDLGVHANGEFSMGTIQANNLMEDQSQLE
SGPLSCLESGPNGTFVGVYDGHGGPETSRFVNNTLFSNLKKFATEHQEMSADVIKKAFLT
TEEEFLSLVKQQWFEKPQIASVGSCCLVGVICSGLLYVANAGDSRVVLGRAEKGARGVTA
IQLSMEHNANNESVRDELRSLHPQDSQIVLLKHKVWRVKGIIQVSRSIGDAYLKKAEFNR
APLLAKFRLPESFSTPILSAEPSIFIHRLTSKDQFLIFASDGLWEHLSNQEAVDTVHSQP
RNGIARRLIKAALRVAAKKREMRYSDLKKIERGVRRHFHDDITVVVVFMDPYSMNRSSSQ
SPILSIRGGGGGGGMPASPKR

Transcript Sequence

Gene sequence data has not been registered.